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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852960.1_cds_XP_016512042.1_24723
CDS Infomation

[gene=LOC107829118] [db_xref=GeneID:107829118] [protein=uroporphyrinogen decarboxylase, chloroplastic-like] [protein_id=XP_016512042.1] [location=join(15396..15516,15961..16082,17268..17378,17575..17763,18298..18423,20823..21338)] [gbkey=CDS]
Sequence

ATGATGTCTTGTAATTACAGCTCTGTTTACTCTTTCTCTTCTATATCTCCTTCCTCTAAA
TCTGCTTTTACTTCTCCCTCTAACTTTAATGTCAACCCCAGAATCTGTTGCTCTGCTGGA
GGAACTGTTGCGGAACCAAAAGCTATAAGTGCAACAGAACCTTTGTTGCTTGATGCTGTA
CGGGGTAAAGAAGTAGAAAGGCCTCCAGTTTGGCTTATGAGACAAGCAGGGAGGTATATG
AAGAGCTATCAACTCCTCTGCGAGAAGTATCCATCATTCCGTGATAGATCAGAGAATGTT
GATCTTGTGGTAGAAATTTCCCTACAACCCTGGAAAGTATTCAGGCCTGATGGGGTCATT
TTATTTTCAGACATTCTTACTCCTCTTTCTGGGATGAATATCCCTTTCGACATTATAAAG
GGGAAGGGTCCTGTCATATTTGATCCCCTGGGAACAGCTGCTGATGTTGAGAAAGTTAGA
GAATTCATTCCTGAAGAATCAGTTCCATATGTTGGAGAAGCATTAACAATTTTGCGGAAA
GAGGTCAATAATCAAGCAGCAGTTCTTGGTTTCGTTGGGGCACCTTTTACCCTGGCGTCA
TATGTGGTTGAAGGTGGTTCCTCTAAGAACTTCACAAAGATAAAGAGATTAGCTTTTGCA
GAGCCCAAGGTCCTGCATGCTCTCCTTCAAAAGTTTGCGACCTCTATGGCTAAATATATC
CGTTACCAAGCAGACAGTGGAGCTCAAGCAGTTCAGATCTTTGATTCATGGGCCACTGAG
CTAAGCCCAGTCGATTTTGAAGAGTTTAGTCTGCCTTATTTAAAACAGATAGTGGAGTCA
GTGAAACTAACCCATCCTGATCTCCCACTGATTCTTTATGCAAGTGGATCTGGTGGCTTG
CTTGAGAGACTACCATTGACAGGTGTAGATGTAGTAAGCTTGGATTGGACAGTGGATATG
GCCGATGGAAGGAGACGACTCGGTCCTAATATTGCCGTACAAGGTAATGTGGATCCTGGT
GTCCTTTTTGGCTCAAAGGAATTTATCACCAATCGAATAAATGATACTGTCAAGAAAGCT
GGTAAAGAGAAACATATTTTGAACCTTGGACATGGCATCAAAGTAGGCACACCAGAGGAA
AATGTTGCTCACTTCTTTGAGATTGCTAAAGGACTTAGGTATTAG

Peptide Sequence

PEP ID

XP_016512042.1
PEP Infomation

PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like [Nicotiana tabacum]
Sequence

MMSCNYSSVYSFSSISPSSKSAFTSPSNFNVNPRICCSAGGTVAEPKAISATEPLLLDAV
RGKEVERPPVWLMRQAGRYMKSYQLLCEKYPSFRDRSENVDLVVEISLQPWKVFRPDGVI
LFSDILTPLSGMNIPFDIIKGKGPVIFDPLGTAADVEKVREFIPEESVPYVGEALTILRK
EVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYI
RYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVESVKLTHPDLPLILYASGSGGL
LERLPLTGVDVVSLDWTVDMADGRRRLGPNIAVQGNVDPGVLFGSKEFITNRINDTVKKA
GKEKHILNLGHGIKVGTPEENVAHFFEIAKGLRY

Transcript Sequence

Gene sequence data has not been registered.